Biological Software: Predictions of genes and other genomic features.



genometools
description The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt.
version 1.3.0
homepage http://genometools.org/
commands gt
manpages
documentation http://genometools.org/
interfaces

genscan
description Identification of complete gene structures in genomic DNA.
version 1.0
homepage http://genes.mit.edu/GENSCANinfo.html
commands genscan
manpages genscan
documentation
interfaces genscan

xpound
description Software for exon trapping.
version
homepage
commands xpound xpscript xreport xshow xspec xtrain xp_simbase xp_simstate
manpages xpound
documentation
interfaces xpound

xxr
description This software is able to extract putative cassette structures that fulfill the criteria established from analysis of previously known cassettes from integrons and superintegrons.
version 3.03
homepage
commands xxr
manpages
documentation
interfaces xxr


Last update: March, 16 2010