RNAlib-2.0.7: H/ProfileAln.h Source File

00001 #ifndef __VIENNA_RNA_PACKAGE_PROFILEALN_H__
00002 #define __VIENNA_RNA_PACKAGE_PROFILEALN_H__
00003 
00004 float profile_aln(const float *T1,
00005                   const char *seq1,
00006                   const float *T2,
00007                   const char *seq2);
00008 
00009 int set_paln_params(double gap_open,
00010                     double gap_ext,
00011                     double seqweight,
00012                     int free_ends);
00013 
00014 #endif