Concept
Iterator
Object that iterates through container.
Iterator | |||||||
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Concept Definition
Required Metafunctions
| Type of an object that stores the difference between two iterators. | |
| Type for reading values. | |
| Reference type. | |
| Type of an object that is suitable to hold size information. | |
| Type of the items in the container. |
Required Functions
| Assigns one object to another object. | |
| Assigns value to item. | |
| Access to the value. | |
| Iterates to next position. | |
| Assigns value to item. | |
| Reference to the value. |
Refinements
| Iterator that knows its container. |
Implemented by
| Iterator for an efficient postorder depth-first search in a suffix tree. | |
| Iterator that is used to traverse containers. | |
| Allows to modify arbitrary iterators by specializing what differs from an origin. | |
| Iterator for suffix trees that can go down, right, and up. Supports depth-first search. |
Used By Function
Functions
| Counts the number of times each residue of a fixed sequence alphabet occurs in a given sequence. | |
| Counts the number of times each residue of a fixed sequence alphabet occurs in a given sequence. | |
| Counts the number of times each residue of a fixed sequence alphabet occurs in a given set of sequences. | |
| Counts the number of times each residue of a fixed sequence alphabet occurs in a given set of sequences. | |
| Determines the background letter frequencies in a given dataset | |
| Determines the background letter frequencies in a given dataset | |
| Converts a pattern into a profile which consists of a set of frequency distributions. | |
| Converts a pattern into a profile which consists of a set of frequency distributions. | |
| Represents the EM algorithm as used by MEME. | |
| Determines the Hamming distance between two sequences. | |
| Determines the Hamming distance between two sequences. | |
| Determines the Hamming distance between two sequences. |
See Also
SeqAn - Sequence Analysis Library - www.seqan.de