Class Specialization
FullInfo
Stores all pieces of information delivered with an alignment in a Blast report.
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FullInfo |
Include Headers
blast.h
Specialization of
Functions
Orientation of the database sequence within a Blast HSP alignment. | |
Turns a HSP from a Blast search into an Alignment object. (BlastHsp) | |
The bit score associated with a Blast HSP. | |
The Smith-Waterman score associated with a Blast HSP. | |
The begin position of the HSP on the database sequence. (BlastHsp) | |
The end position of the HSP on the database sequence. (BlastHsp) | |
The e-value associated with a Blast HSP. (BlastHsp) | |
The number of gaps within a Blast HSP alignment. | |
The begin position of the HSP on the query sequence. (BlastHsp) | |
The end position of the HSP on the query sequence. (BlastHsp) | |
The number of items/characters. (BlastHsp) | |
Orientation of the query sequence within a Blast HSP alignment. |
Example Programs
SeqAn - Sequence Analysis Library - www.seqan.de