/mount/gensoft2/src/ViennaRNA/ViennaRNA-2.1.1/H/2Dfold.h File Reference

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Functions

TwoDfold_varsget_TwoDfold_variables (const char *seq, const char *structure1, const char *structure2, int circ)
 Get a structure of type TwoDfold_vars prefilled with current global settings.
void destroy_TwoDfold_variables (TwoDfold_vars *our_variables)
 Destroy a TwoDfold_vars datastructure without memory loss.
TwoDfold_solutionTwoDfoldList (TwoDfold_vars *vars, int distance1, int distance2)
 Compute MFE's and representative for distance partitioning.
char * TwoDfold_backtrack_f5 (unsigned int j, int k, int l, TwoDfold_vars *vars)
 Backtrack a minimum free energy structure from a 5' section of specified length.

Detailed Description


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