Data Fields | |
| double * | Pi |
| probabilities of interaction | |
| double * | Gi |
| free energies of interaction | |
| double | Gikjl |
| full free energy for interaction between [k,i] k<i in longer seq and [j,l] j<l in shorter seq | |
| double | Gikjl_wo |
| Gikjl without contributions for prob_unpaired. | |
| int | i |
| k<i in longer seq | |
| int | k |
| k<i in longer seq | |
| int | j |
| j<l in shorter seq | |
| int | l |
| j<l in shorter seq | |
| int | length |
| length of longer sequence | |
1.6.1