edu.msu.cme.rdp.classifier.rrnaclassifier
Class LogWordPriorFileParser

java.lang.Object
  edu.msu.cme.rdp.classifier.rrnaclassifier.LogWordPriorFileParser

 class LogWordPriorFileParser
extends java.lang.Object

A parser to parse a read containing a list of the indices of words and the log value of word prior probabilities.

Constructor Summary

LogWordPriorFileParser()
Creates a new instance of LogWordPriorFileParser.

Method Summary

(package private) HierarchyVersion

createLogWordPriorArr(java.io.Reader r, float[] arr, HierarchyVersion version) Reads a file and saves the log word priors in an array.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LogWordPriorFileParser

LogWordPriorFileParser()

Creates a new instance of LogWordPriorFileParser.

Method Detail

createLogWordPriorArr

HierarchyVersion createLogWordPriorArr(java.io.Reader r,
                                       float[] arr,
                                       HierarchyVersion version)
                                 throws java.io.IOException,
                                        TrainingDataException

Reads a file and saves the log word priors in an array. Returns the version information for validation purpose. Input file format: integer follows by a tab and float each line. The first value indicates the index of a word, the second value indicates the log value of word prior probability.

Throws:

java.io.IOException

TrainingDataException