Concept Index

• annotation transfers: Overview
• annotations: External Resources
• annotations: invoking qodgui
• annotations: invoking qod
• annotations: Annotation Transfer
• autoconf: External Resources
• automake: External Resources
• autoproject: External Resources
• autotools: External Resources
• axt format: invoking qod
• Blast: External Resources
• bugs: Problems
• cardinality of sets of intervals: invoking qodgui
• center sequence: invoking qodgui
• central genome: invoking qodgui
• central genome: invoking qod
• central genome: Annotation Transfer
• central genome: Partition
• central genome: MCI
• CLoC: External Resources
• code lines counters: External Resources
• command line: Fourth example
• command line: Third example
• command line: Second example
• command line: First example
• command line: invoking qodgui
• command line: invoking qod
• comparative genomics: Overview
• compared sequence: invoking qod
• development: External Resources
• disabling warnings: invoking qod
• Edit menu: Menu description
• Embl: External Resources
• examples: Sample
• external resources: External Resources
• fasta format: invoking qodgui
• fasta format: invoking qod
• File menu: Menu description
• full version: invoking qodgui
• full version: invoking qod
• full-version option: Second example
• GenBank: External Resources
• genome comparison: External Resources
• genome comparison: invoking qodgui
• genome comparison: invoking qod
• genomes: External Resources
• gettext: External Resources
• getting annotations: External Resources
• getting genomes: External Resources
• getting help: invoking qodgui
• getting help: invoking qod
• Graphical User Interface: Interacting with qod interface
• Graphical User Interface: Using qodgui
• Graphical User Interface: invoking qodgui
• greetings: Overview
• GUI: Overview
• gzip: invoking qodgui
• gzip: invoking qod
• GzStream: External Resources
• help: First example
• help: invoking qodgui
• help: invoking qod
• Help menu: Menu description
• help option: First example
• how to read: Instructions
• I'M Cross: External Resources
• input format: invoking qod
• invoking: invoking qodgui
• invoking: Invoking qod and qodgui
• manual, how to read: Instructions
• Maximal Common Intervals: MCI
• MCI: MCI
• menu: Menu description
• number of collection of set of intervals: invoking qodgui
• ohcount: External Resources
• OpenMP: External Resources
• options: Interacting with qod interface
• options: invoking qodgui
• options: invoking qod
• options: Invoking qod and qodgui
• output: Sample
• output: invoking qod
• overview: Overview
• pairwise similarities: External Resources
• pairwise similarities: invoking qodgui
• pairwise similarities: invoking qod
• Pairwise similarities: MCI
• partition: Partition
• problems: Problems
• random generation: invoking qodgui
• reading: Instructions
• resources: External Resources
• running QOD: invoking qod
• running QodGui: Interacting with qod interface
• running QodGui: Using qodgui
• running QodGui: invoking qodgui
• sample: Sample
• sample output: Sample
• segmentation: MCI
• sequin format: invoking qodgui
• sequin format: invoking qod
• shortcut: invoking qodgui
• silent mode: invoking qod
• statistics: External Resources
• tabular output: invoking qod
• tail recursion: Concept Index
• transfer: Annotation Transfer
• usage: invoking qodgui
• usage: Invoking qod and qodgui
• verbose mode: invoking qod
• version: Second example
• version: Invoking qod and qodgui
• View menu: Menu description
• wxWidgets: External Resources
• Yass: External Resources